I think that you can easily get by with a generic dosbox.conf for the fan games here, perhaps just one embedded in the jdosbox.jar. I doubt that there are any timer bugs in the fan SCI games, but I default to 10000 cycles (official DOSBox) for the SCI games for my installers. For most games this is slow enough to avoid most unpatched speed bugs and fast enough to not notice any lag. Only the SCI32 games seem to want more. LSL7DEMO, an SCI32 game, does not run quite right in jDOSBox, even when cycles are set to max. I am not sure how complete or compatible the dynamic core is in jDOSBox, yet.
Outside of that, I think that the best way to speed things up is to ZIP/JAR the IMG files to make it a much smaller (i.e. faster) download.